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HomeMy WebLinkAbout6. Exhibit B - Biblio of SciTech Info Considered_2013Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 1 10,000 Years Institute. 2004. Integrated Population and Environmental Baseline Evaluation for Bull Trout, Lower Hoh River. Prepared for Jefferson County Public Works Department. July 2004. 2 54th Joint Western Fish Disease Workshop & AFS Fish health Section Meeting. 2013. Port Townsend, Washington. 3 Abbe, T. B., and D. R. Montgomery. 1996. Large woody debris jams, channel hydraulics, and habitat formation in large rivers . Regulated Rivers: Research & Management. 12:201-221. 4 Abbe, T. B., and D. R. Montgomery. 2003. Patterns and processes of wood debris accumulation in the Queets River Basin, Washington. Geomorphology, 51:81-107. 5 Abbe, T. B., Pess, G., Montgomery, D. R., and K. L. Fetherston. 2003. Integrating Engineered Log Jam Technology into River Rehabilitation . In D. R. Montgomery, S. Bolton, D. B. Booth, and L. Wall (eds) Restoration of Puget Sound Rivers, 443-482. 6 Abt, S.R., W.P. Clary, and C.I. Thorton. 1994. Sediment deposition and entrapment in vegetated streambeds. In: Proceedings of the American Society of Civil Engineers, Irrigation and Drainage Division 120:1098-1111. 7 Adams, M.J. 1999. Correlated factors in amphibian decline: Exotic species and habitat change in Western Washington. Journal of Wildlife Management 63(4): 1162-1171. 8 Admin. April 2011. Montana Hutterite colonies diving into commercial salmon farming / fresh Alaska salmon. www.alaskafreshsalmonm.com/2011/04/15/montana-hutterite-colonies-diving-into-commercial- salmon-farming-3/ 3 pp. 9 Admiralty Audubon Society. 1990. Jefferson County Significant Natural Areas Vol. 1. East Jefferson. Port Townsend, Washington. 10 Alberti, M. et al. 2006. The impact of urban patterns on aquatic ecosystems: An empirical analysis in Puget lowland sub-basins. Article in Press: Landscape Urban Planning. doi: 10.1016/jlandurbplan.2006.08.0. www.elsevier.com/locate/landurbplan 11 Allan, J.D. 2004. Landscapes and riverscapes: the influence of land use on stream ecosystems. Annual Review of Ecology, Evolution and Systematics 35: 257-284. 12 Alvarez, D. 2011. Outline of '86 "Recommended Interim Guidelines for the Management of Salmon Net Pen (aqua) Culture". 7 pp. 13 Alvarez, D. April 11, 2011. Summary 1990 Final EIS; Finfish - Final Programmatic EIS-Jan. 1990 Table 1 Summarized by DA. 4 pp. 14 American Gold Seafoods, LLC. January 2010. NPDES Pollution Prevention Plan. 4 pp. 15 Amos, K. 2003. Disease Interactions in Wild and Atlantic Salmon [slideshow]; Pacific States Marine Fisheries Council Conference. 59 pp. 16 Amos, K.H. and Appleby, A. September 1999. Atlantic Salmon in Washington State: A fish management perspective. Washington Department of Fish and Wildlife. 13 pp. 17 ApendiX a (Excerpt from "ISAV Surveillance Needs and Proposed Plan for the Pacific Northwest United States" dated march 10, 2012). 18 Aquaculture Quick Facts - with attached list of Issues 1 through 6 summary of content. 6 pp. 19 Aquaculture Siting Study. October 1986. Prepared by EDAW Inc. and CH2M/Hill for WA Dept. of Ecology. 104 pp. 20 AquaOptima RAS. www.aquaoptima.com 3 pp. 21 Azous, A.L. and K.O. Richter. 1995. Amphibian and plant community responses to changing hydrology in urban wetlands . Pages 156-162 in E. Robichaud (ed.), Puget Sound Research 1995 Proceedings, Volume 1. Olympia, WA: Puget Sound Water Quality Authority. Note: The citations below were considered, but any conclusions/findings within those citations were not necessarily incorporated into the final SMP. 1 of 43 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 22 Azous, Amanda L. and Richard R. Horner, 1997. Wetlands and Urbanization: Implications for the Future. Final Report of the Puget Sound Wetlands and Stormwater Management Research Program. Available on the internet at http://splash.metrokc.gov/wlr/basins/weturban.htm. 23 B. This document is not intended to be an exhaustive list of all sources considered. All sources considered, including public comment letters and other information, are contained in the record maintained by the Jefferson County Department of Community Development. 24 Bahls, P. 2004. Fish Distribution and Abundance in Shallow Intertidal Habitats of Tarboo and North Dabob Bays. Prepared for Jefferson County Marine Resources Committee. February 2004. 25 Bahls, P. 2006. Personal communication to ESA Adolfson, comments on preliminary draft I&C report. October 2006. 26 Bahls, P., C. Kindberg, M. Wait, J. Glasgow. 2006. An Assessment of Error in State Shoreline Designation for Lakes in Washington. Northwest Watershed Institute and Washington Trout. August, 2006. 27 Bahls, Peter, Cary Kindberg, Micah Wait, and Jamie Glasgow. 2002. An Assessment of Error in State Shoreline Designation for Lakes of Washington. http://www.washingtontrout.org/ludlow/index.shtml 28 Baker, J.M.R. and T.R. Halliday. 1999. Amphibian colonization of new ponds in an agricultural landscape. Herpetological Journal 9:55-63. 29 Bargmann, G. 1998. Forage Fish Management Plan. Washington Department of Fish and Wildlife. 30 Bash, Berman, and Bolton. 2001. Effects of sediment and suspended solids on salmonids. UW Center for Streamside Studies. November, 2001. 31 Beamer, Eric, Aundrea McBride, Rich Henderson, and Karen Wolf, May 2003. The Importance of Non-Natal Pocket Estuaries in Skagit Bay to Wild Chinook Salmon: An Emerging Priority for Restoration. Skagit System Cooperative Research Department. 32 Beamish, R. J., S. Jones, CE. Neville, F. Sweeting, G. Karreman, S. Saksida, and E. Gordon. 2006. Exceptional marine survival of pink salmon that entered the marine environment in 2003 suggests that farmed Atlantic salmon and Pacific salmon can coexist successfully in a marine ecosystem on the Pacific coast of Canada. ICES Journal of Marine Science, Vol. 63. Pp. 1326 - 1337. 33 Beardslee, K. June 2007. Wild Fish Conservancy comment letter to WA Dept. of Ecology re: Draft Renewal NPDES Permits, American Gold Seafoods Marine Net Pens. 17pp. 34 Belknap, William. 1994. Wall-base channels in western Washington: Location, detection, mapping and winter use by juvenile salmonid fishes. M.S. Thesis, U.W. Center for Streamside Studies. http://depts.washington.edu/cwws/Theses/belknap.html 35 Benbrook, C.M. February 2002. Antibiotic drug use in U.S. aquaculture. The Institute for Agriculture and Trade Policy. 18 pp. 36 Benda, L.E., P. Bigalow, and W. Worsley. 2002. Recruitment of instream large wood in old-growth and second-growth redwood forests, northern California, U.S.A. Canadian Journal of Forestry Research 32: 1460–1477. 37 Berbells, R.S. 2003. Shoreline Survey of the Discovery Bay Shellfish Growing Area. Prepared by Scott Berbells, Public Health Advisor. March 2004. 38 Beschta, R.L. 1978. Long-term patterns of sediment production following road construction and logging in the Oregon Coast Range. Water Resources Research. 14:1101-1016. 39 Bilby, R. E. 1984. Characteristics and frequency of cool-water areas in a western Washington stream. Journal of Freshwater Ecology 2: 593-602. 40 Bilby, R.E. and J.W. Ward. 1989. Changes in characteristics and function of woody debris with increasing size of streams in western Washington. Transactions of the American Fisheries Society 188:368-378. 41 Bilby, R.E. and J.W. Ward. 1989. Changes in characteristics and function of woody debris with increasing size of streams in western Washington. Transactions of the American Fisheries Society 188:368-378. 2 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 42 Bishop D.M. and M.E. Stevens. 1964. Landslides on logged areas in southeast Alaska. U.S. Dept. Agr. For. Serv. Res. Pap. NOR-1. 43 Blunt, D.J., D.J. Easterbrook, and N.W. Rutter. 1987. Chronology of Pleistocene sediments in the Puget Lowland, Washington, Washington Division of Earth Resources Bulletin 77: 321-353. 44 Bolton et al. 2001. Ecological Issues in Floodplains and Riparian Corridors. Submitted to Washington Department of Fish and Wildlife, Washington Department of Ecology, Washington Department of Transportation. July 2001. 45 Booth, D.B. 1994. Glaciofluvial infilling and scour of the Puget Lowland, Washington, during ice-sheet glaciation. Geology 22: 695-698. 46 Booth, D.B. 2000. Forest Cover, Impervious-Surface Area, and the Mitigation of Urbanization Impacts in King County, Washington. Prepared for King County Water and Land Resources Division. Seattle, Washington. 18 pp. 47 Booth, D.B. and C.R. Jackson. 1997. Urbanization of aquatic systems: degradation thresholds, stormwater detection, and the limits of mitigation. Journal of the American Water Resources Association 33(5): 1077- 1090. 48 Booth, D.B. and L.E. Reinelt. 1993. Consequences of urbanization on aquatic systems – Measured effects, degradation thresholds, and corrective strategies. Proceedings from Watershed ’93 A National Conference on Watershed Management, March 21-23, 1993. pp. 545-550. 49 Boyce, J. A. December 1988. WA Department of Ecology: Use Conflicts and Floating Aquaculture in Puget Sound. 43 pp. 50 Brabec, E., S. Schulte, and P.L. Richards. 2002. Impervious Surfaces and Water Quality: A Review of Current Literature and Its Implications for Watershed Planning. Journal of Planning Literature 16(4) 499-514. 51 Brennan, J.S. Riparian Functions and the Development of Management Actions in Marine Nearshore Ecosystems. p. 11 in Lemieux, J.P., Brennan, J.S., Farrell, M., Levings, C.D., and Myers, D. Proceedings of the DFO/PSAT sponsored Marine Riparian Experts Workshop , Tsawwassen, BC, February 17-18, 2004. 2004. Can. Man. Rep. Fish. Aquat. Sci. No. 2680. 52 Brennan, J.S., and H. Culverwell. 2004. Marine Riparian: An Assessment of Riparian Functions in Marine Ecosystems. Published by Washington Sea Grant Program Copyright 2005, UW Board of Regents Seattle, WA. 34 p. http://www.wsg.washington.edu/research/ecohealth/brennan.pdf 53 Brennan, J.S., and H. Culverwell. 2004. Marine Riparian: An Assessment of Riparian Functions in Marine Ecosystems. Published by Washington Sea Grant Program Copyright 2005, UW Board of Regents, Seattle, WA. 27p. 54 Brewer, S., J. Watson, D. Christensen, and R. Brocksmith. 2005. Hood Canal and Eastern Strait of Juan de Fuca Summer Chum Salmon Recovery Plan. Hood Canal Coordinating Council, version November 15, 2005. 55 Bricknell, I. R., S. J. Dalesman, B. O'Shea, C. C. Pert and A. J. Luntz. August 2006. Effect of environmental salinity on sea lice Lepeophtheirus salmonis settlement success. 1 P. 56 Bright, K. April 5, 2011. State, Local, and Federal Regulatory Controls for Finfish Net Pen Aquaculture in Washington. 3 pp. 57 Brooks, K. M. 2005. Reviews in Fisheries Science. The Effects of Water Temperature, Salinity, and Currents on the Survival and Distribution of the Infective Copepodid Stage of Sea Lice (Lepeophtheirus Salmonis) Originating on Atlantic Salmon Farms in the Broughton Archipelago of British Columbia, Canada. 13: Pp. 177-204 58 Brooks, K. M. 1991. The Genetics and Epizootiology of Hemic Neoplasia in Mytilus edulis. 1991. Ph.D. dissertation, University of Washington, Seattle, WA. 282 pp. 59 Brooks, K. M. 1992. Infaunal community structure changes associated with organic loading at an intensive salmon husbandry site. Report to the Washington State Department of Natural Resources, Olympia, Washington. 19 pp. 3 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 60 Brooks, K. M. 1992. Review of bacterial and toxicant contamination in Dyes Inlet, WA and request for shellfish harvest certification of Chico Bay, Phiney Bay and the east side of Erland Point, all in Dyes Inlet, Kitsap County, Washington. 21 pp. 61 Brooks, K. M. and C. V. W. Mahnken. 2003. Interactions of Atlantic salmon in the Pacific northwest environment. II. Organic wastes. Fisheries Research 62 (2003) Pp. 255-293 62 Brooks, K. M. and Elston R. A. 1991. Epizootiology of hemic neoplasia in Mytilus trossulus in Washington State, Part II. J. Shellfish Res., 10:223 63 Brooks, K. M. and S. R. M. Jones. Perspectives on pink Salmon and sea lice: scientific evidence fails to support the extinction hypothesis. 15 pp. 64 Brooks, K.M. (In-Review). The frequency of Mytilus edulis galloprovincialis alleles in Washington State marine waters where the species is commercially cultivated. 14 pp. 65 Brooks, K.M. , A.R. Stierns and C. Backman. 2004. Seven year remediation study at the Carrie Bay Atlantic salmon (Salmo salar ) farm in the Broughton Archipelago, British Columbia, Canada. Aquaculture. Aquaculture 239, pp. 81-123. 66 Brooks, K.M. 1991. Shellfish Inventory and Management Considerations associated with the intensive cultivation of Crassostrea gigas in California and Washington by Coast Oyster Company. Report prepared for First Interstate Bank, Seattle, Washington. 67 to control burrowing shrimp in Willapa Bay, Washington - July to September, 1992. Report to the US EPA, Contract BSCC 692. 31 pp. plus appendices. 68 Brooks, K.M. 1993. Impacts on Benthic Invertebrate Communities Associated with the Aerial Application of Carbaryl to Control Burrowing Shrimp on Cultivated Oyster Beds in Willapa Bay for the U.S. Environmental Protection Agency. 63 pp. 69 Brooks, K.M. 1993. Integrated Pest Management Program Development. Differential pesticide impacts on closely related invertebrate species in eelgrass meadows of Pacific Northwest estuaries. Pacific Estuarine Research Society Annual Meeting, Long Beach, WA, May 14, 1993. 47 pp. 70 Brooks, K.M. 1993. Literature Review and Assessment of the Environmental Risks Associated with the Use of Treated Wood Products in Aquatic Environments. Report prepared for, and published by, the Western Wood Preservers Association, 601 Main Street, Suite 401, Vancouver, WA 98550. 71 Brooks, K.M. 1993. Recovery of benthic communities associated with interrupted production at a commercial salmon net-pen in Port Townsend, WA. Report to the Washington State Department of Natural Resources. (Included in the annual monitoring report for the Paradise Bay net pen site.) 72 Brooks, K.M. 1994. Histopathological Examination of Archived Bivalves Mytilus edulis trossulus and Protothaca staminea in Support of the Prince William Sound Long Term Monitoring Program. Report to NOAA/ORCA/HMRAD/ORCA32. 7600 Sand Point Way NE, Seattle, WA 98115. 40 pp. 73 Brooks, K.M. 1994. Histopathological Examination of Archived Bivalves Mytilus edulis trossulus and Protothaca staminea in Support of the Prince William Sound Long Term Monitoring Program. Report to NOAA/ORCA/HMRAD/ORCA32. 7600 Sand Point Way NE, Seattle,WA 98115. 40 pp. 74 Brooks, K.M. 1995. Aquatic Environmental Risk Assessments and a Spreadsheet Model Predicting Creosote Treated Wood Contributions of Polycyclic Aromatic Hydrocarbons to the Water Column and Sediments. ASTM Conference Proceedings. Fifth Symposium on Environmental Toxicology and Risk Assessments: Biomarkers and Risk Assessment. Sponsored by: ASTM Committee E-47 on Biological Effects and Environmental Fate. April 3 - 5, 1995. Denver, Colorado. 75 Brooks, K.M. 1995. Assessment of the Environmental Risks Associated with the Use of Treated Wood in Lotic Systems. Published by the Western Wood Preservers Institute, 601 Main Street, Suite 401, WA 98660. 17 pp. 4 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 76 Brooks, K.M. 1995. Literature Review, Computer Model and Assessment of the Potential Environmental Risks Associated With Creosote Treated Wood Products Used in Aquatic Environments. Published by the Western Wood Preservers Institute, 601 Main Street, Suite 401, Vancouver, WA 98660. 137 pp. 77 Brooks, K.M. 1995. Long Term Response of Benthic Invertebrate Communities Associated with the Cultivated Pacific Oyster (Crassostrea gigas ) Beds in Willapa Bay, Washington to Fulfill Requirements of the EPA Carbaryl Data Call In. Report to the U.S. EPA under Contract BSCC 692. 69 pp. 78 Brooks, K.M. 1996. Assessment and Management of Wastes Associated with the Intensive Culture of Salmon in British Columbia, Canada. Prepared for the B.C. Salmon Farmers Association, Vancouver, B.C. 47 pp. 79 Brooks, K.M. 1996. Baseline Shellfish Surveys of Tidelands Near the Tatitlek, Nanwalek and Port Graham Villages in Support of the Nanwalek/Port Graham/Tatitlek Clam Restoration Project; Exxon Valdez Oil Spill Trustee Council Project Number 95131. 52 p. plus appendices. 80 Brooks, K.M. 1996. City of Ocean Shores Wetland Inventory. Produced for the City of Ocean Shores under Department of Ecology Grant G9600033. 28 pp. plus appendices. 81 Brooks, K.M. 1996. City of Ocean Shores Wetland Inventory. Produced for the City of Ocean Shores under Department of Ecology Grant G9600033. 28 pp. plus appendices. Brooks. K.M. 1997. Literature Review and Assessment of the Environmental Risks Associated with the Use of ACZA Treated Wood Products in Aquatic Environments. Second Edition. Prepared for the Western Wood Preservers' Institute 7017 NE Highway 99, Suite 108, Vancouver, WA 98665. 98 pp. 82 Brooks, K.M. 1996. Evaluating the environmental risks associated with the use of chromated copper arsenate-treated wood products in aquatic environments. Estuaries Vol. 19, No. 2A, p. 296-305. 83 Brooks, K.M. 1996. September, 1996, Baseline electrophoretic survey of mussels, Mytilus edulis trossulus and Mytilus edulis galloprovincialis in Holmes Harbor, Washington. Produced for Taylor United, Inc. Southeast 130 Lynch Road, Shelton, Washington 98584 in fulfillment of conditions of Island County Shoreline Substantial Development Permit SPD 013/94 and Army Corps of Engineers Permit COE (94-1- 00327). 13 pp. 84 Brooks, K.M. 1997. Final Report – PAH Sediment Sampling Study in River South Parcel – July 17, 1996 to August 26, 1997. Prepared for Commonwealth Edison Company, Environmental Services Department, One First National Plaza, 10 South Dearborn, Chicago, Illinois 60690. 21 pp. plus appendices. 85 Brooks, K.M. 1997. Literature Review and Assessment of the Environmental Risks Associated With the Use of CCA Treated Wood Products in Aquatic Environments. 3rd Edition. Prepared for the Western Wood Preservers Institute, 7017 NE Highway 99 Ste. 108, Vancouver, WA 98665. 100 pp. 86 Brooks, K.M. 1998. 1998 Annual Report of the Evaluation of Polycyclic Aromatic Hydrocarbon Migration From Railway Ties Into Ballast and Adjacent Wetlands – a Mesocosm Study. Prepared for Dr. Richard Monzingo, Commonwealth Edison, P.O. Box 767, Chicago, IL 60690-0767 for submission to the U.S. Fish and Wildlife Service. 34 pages plus appendices. 87 Brooks, K.M. 1998. Literature Review and Assessment of the Environmental Risks Associated With the Use of ACQ Treated Wood Products in Aquatic Environments. Prepared for: Western Wood Preservers Institute, 7017 NE Highway 99, Suite 108, Vancouver, WA 98665 88 Brooks, K.M. 1998. Literature Review and Assessment of the Environmental Risks Associated With the Use of ACQ Treated Wood Products in Aquatic Environments. Prepared for: Western Wood Preservers Institute, 7017 NE Highway 99, Suite 108, Vancouver, WA 98665. 5 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 89 Brooks, K.M. 1998. Literature Review, Computer Model and Assessment of the Potential environmental risks Associated with Pentachlorophenol Treated Wood Products Used in Aquatic Environments. Prepared for: Western Wood Preservers Institute, 7017 NE Highway 99, Suite 108, Vancouver, WA 98665. 90 Brooks, K.M. 1999. Stolt Canada Arrow Pass Salmon Farm Benthic and Shellfish Effects Study 1996 – 997. Produced for Stolt Sea Farm Incorporated, 1405 Spruce Street, Campbell River, British Columbia, Canada V9W 7K1. 107 pp. plus appendices. 91 Brooks, K.M. 1999. Stolt Canada Arrow Pass Salmon Farm Benthic and Shellfish Effects Study 1996 – 1997. Produced for Stolt Sea Farm Incorporated, 1405 Spruce Street, Campbell River, British Columbia, Canada V9W 7K1. 107 pp. plus appendices. 92 Brooks, K.M. 2000. Assessment of the environmental effects associated with wooden bridges preserved with creosote, pentachlorophenol or chromated-copper-arsenate (CCA-C). U.S. Department of Agriculture – Res. Pap. FPL-RP-587. Madison, WI: U.S. Department of Agriculture, Forest Service, Forest Products Laboratory, 100 pp. 93 Brooks, K.M. 2000. Database report describing sediment physicochemical response to salmon farming in British Columbia from 1996 through April 2000. Report prepared for the British Columbia Ministry of Environment and the British Columbia Salmon Farmers Association, 408 West Pender Street, Vancouver, British Columbia, Canada V6E 2S9. 41 pp. 94 Brooks, K.M. 2000. Determination of copper loss rates from Flexgard XI™ treated nets in marine environments and evaluation of the resulting environmental risks. Report prepared for the British Columbia Ministry of Environment and the British Columbia Salmon Farmers Association. 24 pp. 95 Brooks, K.M. 2000. Environmental effects associated with the use of CCA-C, ACZA and ACQB pressure treated wood used to construct boardwalks in wetland areas. U.S. Department of Agriculture – Forest Products Laboratory, Research Paper FPL-RP-582. 126 pp. plus appendices. 96 Brooks, K.M. 2000. Final Report – Evaluation of Polycyclic Aromatic Hydrocarbon Migration From Railway Ties Into Ballast and Adjacent Wetlands. Midwest Generation, Corporate EH&S Group, 440 S Lasalle Street, Suite 3500, Chicago, IL 60605. 94 pp. 97 Brooks, K.M. 2000. Literature review and model evaluation describing the environmental effects and carrying capacity associated with the intensive culture of mussels (Mytilus edulis galloprovincialis ). Technical appendix for an Environmental Impact Statement prepared for Taylor Resources, Southeast 130 Lynch Road, Shelton, WA 98584. 129 pp. 98 Brooks, K.M. 2000. Recommended interim sediment quality guidelines for evaluating the environmental response to marine netpen culture operations. Prepared for the British Columbia Salmon Farmers’ Association, Number 408 – 1200 West Pender Street, Vancouver, British Columbia, Canada V6E 2S9. 11 pp. 99 Brooks, K.M. 2000. Results of the Fall 2000 interim salmon farm monitoring at tenures operated by Stolt Sea Farms and Pacific National Aquaculture in British Columbia. Prepared for the British Columbia Salmon Farmers’ Association. Number 408 – 1200 West Pender Street, Vancouver, British Columbia, Canada V6E 2S9. 15 pp. 100 Brooks, K.M. 2000. Results of the June 2000 interim salmon farm monitoring at Pacific National Group netpens located in Clayoquot Sound, British Columbia. Report prepared for Pacific National Group, 737 Yates Street – Suite 310, Victoria, British Columbia, Canada V8W 1L6. 35 pp. 101 Brooks, K.M. 2000. Results of the June 2000 interim salmon farm monitoring at Stolt Sea Farm, Inc. salmon aquaculture tenures located in British Columbia. Report prepared for Stolt Sea arm, Inc. 1261 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 93 pp. 102 Brooks, K.M. 2000. Results of the June 2000 interim salmon farm monitoring at Stolt Sea Farm, Inc. salmon aquaculture tenures located in British Columbia. Report prepared for Stolt Sea Farm, Inc. 1261 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 93 pp. 6 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 103 Brooks, K.M. 2000. Sediment concentrations of sulfides and total volatile solids near salmon farms in British Columbia, Canada, during the period June through August, 2000 and recommendations for additional sampling. Prepared for the British Columbia Ministry of Environment and the British Columbia Salmon Farmers’ Association. 16 pp. 104 Brooks, K.M. 2000. Sediment concentrations of zinc near salmon farms in British Columbia, Canada during the period June through August 2000. Report prepared for the British Columbia Ministry of Environment and the British Columbia Salmon Farmers Association. 12 pp. 105 Brooks, K.M. 2001. An evaluation of the relationship between salmon farm biomass, organic inputs to sediments, physicochemical changes associated with those inputs and the infaunal response – with emphasis on total sediment sulfides, total volatile solids, and oxidationreduction potential as surrogate endpoints for biological monitoring – Final Report. Technical report produced for the Technical Advisory Group (TAG) to the British Columbia Ministry of Environment, 2080-A Labieux Road, Nanaimo, British Columbia, Canada V9T 6J9. 186 pp. plus appendices. 106 Brooks, K.M. 2001. An evaluation of the relationship between salmon farm biomass, organic inputs to sediments, physicochemical changes associated with those inputs and the infaunal response – with emphasis on total sediment sulfides, total volatile solids, and oxidationreduction potential as surrogate endpoints for biological monitoring – Final Report. Technical report produced for the Technical Advisory Group (TAG) to the British Columbia Ministry of Environment, 2080-A Labieux Road, Nanaimo, British Columbia, Canada V9T 6J9. 186 pp. plus appendices. 107 Brooks, K.M. 2001. Chapter 4. Salmon Farming and the Environment. In: Nash (2001) The Net-pen Salmon Farming Industry in the Pacific Northwest. NOAA Technical Memorandum NMFS-NWFS-NWFSC-49. pp. 36 – 73. 108 Brooks, K.M. 2001. Dungeness crab (Cancer magister ) and spot prawn (Pandalus platyceros ) holding and feeding studies in support of Emamectin Benzoate acute toxicity testing. Technical report produced for Dr. Rejean Berman, Schering-Plough Animal Health, 3535 Trans-Canada Highway, Pointe-Claire, Quebec, Canada H9R 1B4. 50 pp. 109 Brooks, K.M. 2001. Dungeness crab (Cancer magister ) and spot prawn (Pandalus platyceros ) holding and feeding studies in support of Emamectin Benzoate acute toxicity testing. Technical report produced for Dr. Rejean Berman, Schering-Plough Animal Health, 3535 Trans-Canada Highway, Pointe-Claire, Quebec, Canada H9R 1B4. 50 pp. 110 Brooks, K.M. 2001. Environmental assessment and monitoring program associated with aquaculture production facilities operated by Hubbs SeaWorld Research Institute at the Grace oil drilling platform in the Santa Barbara Channel, California. Technical report prepared for Hubbs SeaWorld Research Institute, 2595 Ingraham Street, San Diego, California 92109. 26 pp. 111 Brooks, K.M. 2001. Final Report – Chugach Regional Resources Commission Bivalve Enhancement Program – Bivalve inventories and native littleneck clam (Protothaca staminea ) culture studies – Exxon Valdez Oil Spill Trustee Council Project Number 95131. 189 pp. 112 Brooks, K.M. 2001. Native littleneck clam (Protothaca staminea ) culture and associated environmental effects in Alaska. Technical paper presented at the November 13 – 14, 2001 Alaska Sea Grant Program conference in Anchorage, Alaska. 23 pp. 113 Brooks, K.M. 2001. New salmon net-pen site assessments and baseline surveys at Beddingfield and South Millar Channel, Clayoquot Sound, British Columbia. Technical reported prepared for Pacific National Aquaculture, 1001 Wharf Street – Suite 300, Victoria, British Columbia, Canada V8W 1T8. 21 pp. 114 Brooks, K.M. 2001. Recommendations to the British Columbia Farmed Salmon Waste Management Technical Advisory Group for Biological and Physicochemical Performance Standards Applicable to Marine Netpens. Technical report produced for the Technical Advisory Group of the British Columbia Ministry of Environment, 2080-A Labieux Road, Nanaimo, British Columbia, Canada V9T 6J9. 24 pp. 7 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 115 Brooks, K.M. 2001. Results of Summer 2001 interim salmon farm monitoring at Pacific National Aquaculture netpens located in Clayoquot Sound, British Columbia. Technical reported prepared for Pacific National Aquaculture, 1001 Wharf Street – Suite 300, Victoria, British Columbia, Canada V8W 1T8. 65 pp. 116 Brooks, K.M. 2001. Results of the July 2001 interim salmon farm monitoring at Stolt Sea Farm, Inc. salmon aquaculture tenures located in British Columbia. Technical report prepared for Stolt Sea Farm, Inc. 1261 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 64 pp. 117 Brooks, K.M. 2002. Characterizing the environmental response to pressure treated wood. Proceedings. In: Enhancing the Durability of Lumber and Engineered Wood Products”, Forest Products Society, 2801 Marshall Court, Madison, WI 53705-2299. pp. Annual Meeting, February 11 – 13, 2002, Kissimmee, Florida. Pp. 59-71. 118 Brooks, K.M. 2002. Characterizing the environmental response to pressure treated wood. Proceedings. In: Enhancing the Durability of Lumber and Engineered Wood Products”, Forest Products Society, 2801 Marshall Court, Madison, WI 53705-2299. pp. Annual Meeting, February 11 – 13, 2002, Kissimmee, Florida. Pp. 59-71. 119 Brooks, K.M. 2002. Copper loss from copper naphthenate treated piling immersed in fresh water. Technical report prepared for Mr. James A. Brient, Naphthenic Acid Technology Manager, Merichem Company Research Center, 1503 Central, Houston, Texas 77012-2797. 9 pp. plus appendices. 120 Brooks, K.M. 2002. Copper loss from copper naphthenate treated piling immersed in fresh water. Technical report prepared for Mr. James A. Brient, Naphthenic Acid Technology Manager, Merichem Company Research Center, 1503 Central, Houston, Texas 77012-2797. 9 pp. plus appendices. 121 Brooks, K.M. 2002. Literature review, computer model and assessment of the potential environmental risks associated with copper naphthenate treated wood products used in aquatic environments. Technical report prepared for Mr. Gerald E. Davis, Merichem Chemicals and Refinery Services LLC, 2701 Warrior Road, P.O. Box 40777, Tuscaloosa, Alabama 24404. 22 pp. 122 Brooks, K.M. 2002. Results of the July 2001 interim salmon farm monitoring at Stolt Sea Farm, Inc. salmon aquaculture tenures located in British Columbia. Technical report prepared for Stolt Sea Farm, Inc. 1261 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 81 pp. 123 Brooks, K.M. 2003. An assessment of whether pink salmon (Oncorhynchus gorbuschai) runs in the Broughton Archipelago of British Columbia, Canada are threatened by sea lice (Lepeophtheirus salmonis ) infections originating on cultured Atlantic salmon (Salmo salar ). Legal affidavit prepared for Mr. Christopher Harvey, Q.C., MacKenzie Fujisawa Barristers & Solicitors, 1600-1095 West Pender Street, Vancouver, British Columbia Canada V6E 2M6 57 pp. 124 Brooks, K.M. 2003. Application of the Infaunal Trophic Index to the evaluation of macrobenthic effects associated with salmon farming in British Columbia. Technical report prepared for the British Columbia Ministry of Agriculture, Food and Fisheries. 30 pp. 125 Brooks, K.M. 2003. Chemical and Biological Remediation at the Upper Retreat Atlantic Salmon Farm in Retreat Passage, Broughton Archipelago, British Columbia – Tenure 1404379. Technical report prepared for Stolt Sea Farms, 1761 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 34 pp. 126 Brooks, K.M. 2003. Chemical and Biological Remediation at the Upper Retreat Atlantic Salmon Farm in Retreat Passage, Broughton Archipelago, British Columbia – Tenure 1404379. Technical report prepared for Stolt Sea Farms, 1761 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 34 pp. 127 Brooks, K.M. 2003. Chemical and biological remediation of the benthos near Atlantic salmon farms. Aquaculture, Volume 219, Issues 1-4, pp. 355-377. 8 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 128 Brooks, K.M. 2003. Comments regarding the Environmental Protection Agencies Draft preliminary Risk Assessment on Creosote. Technical response provided to U.S. Creosote Council II, care-of Mr. David Webb, 357 Browns Hill Road, Valencia, PA 16059. 47 pp. 129 Brooks, K.M. 2003. Comments regarding the Environmental Protection Agency’s Draft Preliminary Risk Assessment for Arsenical Wood Preservatives. Technical response provided to the Arsenical Wood Preservatives Task Force, American Chemistry Council, care-of Mr. Has Shah, 1300 Wilson Blvd., Arlington, VA 22209. 41 pp. 130 Brooks, K.M. 2003. Environmental response to the use of ACQ-C, CCA-C Tebuconazole, and Untreated southern yellow pine floats and posts in Montgomery’s Pond. Technical report produced for Chemical Specialties Inc. One Woodlawn Green, Suite 250, Charlotte, North Carolina 28217. 31 pp. plus appendices. 141 pp. plus appendices. 131 Brooks, K.M. 2003. Environmental Risk Assessment for CCA-C and ACZA Treated Wood. Technical report prepared for the Western Wood Preservers Institute, 7017 NE Highway 99 Ste. 108, Vancouver, WA 98665. 40 pp. 132 Brooks, K.M. 2003. Environmental Risk Assessment for CCA-C and ACZA Treated Wood. Technical report prepared for the Western Wood Preservers Institute, 7017 NE Highway 99 Ste. 108, Vancouver, WA 98665. 40 pp. 133 Brooks, K.M. 2003. Measurement of nutrients in bottom water under and adjacent to the Deepwater Point mussel farm in Totten Inlet, Washington. Prepared for the Pacific Shellfish Institute, 120 State Avenue NE #142, Olympia, Washington as part of Department of Commerce Award No. NA16RG1591. 9 pp. 134 Brooks, K.M. 2003. Metal loss rates as a function of rainfall from southern yellow pine treated with ACQ-C preservative amended with and without water repellents. Technical report produced for Chemical Specialties Inc. One Woodlawn Green, Suite 250, Charlotte, North Carolina 28217. 31 pp. plus appendices. 22 pp. plus appendices. 135 Brooks, K.M. 2003. Metal loss rates from southern yellow pine treated with ACQ-C preservative amended with and without water repellents and from CCA-C treated wood. Technical report produced for Chemical Specialties Inc. One Woodlawn Green, Suite 250, Charlotte, North Carolina 28217. 31 pp. plus appendices. 136 Brooks, K.M. 2004. Baseline inventory of macrobenthos at Stolt Sea Farms’ Humphrey Rocks Tenure in Tribune Channel, Broughton Archipelago, British Columbia. Technical report prepared for Stolt Sea Farms, 1761 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 18 pp. 137 Brooks, K.M. 2004. Creosote treated piling – perceptions versus reality. Public outreach document prepared for U.S. Creosote Council II, care-of Mr. David Webb, 357 Browns Hill Road, Valencia, PA 16059. 15 pp. 138 Brooks, K.M. 2004. Environmental feasibility study for aquaculture in Port Angeles Harbor and the Straits of Juan de Fuca. Technical report prepared for Olympic Aqua Ventures, L.L.C., 111 Hurricane View Lane Port Angeles, WA 98362 42 pp. 139 Brooks, K.M. 2004. Environmental response to ACZA treated wood structures in Pacific Northwest marine environments. Technical report prepared for J.H. Baxter and Company, 1700 South El Camino Real, San Mateo, CA 94402. 30 pp. 140 Brooks, K.M. 2004. Environmental response to creosote treated wood structures in Puget Sound, Washington. Technical report prepared for U.S. Creosote Council II, care-of Mr. David Webb, 357 Browns Hill Road, Valencia, PA 16059. 52 pp. 141 Brooks, K.M. 2004. Evaluation of the macrobenthic community at the edge of tenure on the 300 oT transect at Stolt Sea Farms’ Swanson Island Tenure (Number 1304381) in the Broughton Archipelago, British Columbia. Technical report prepared for Stolt Sea Farms, 1761 Redwood Street, Campbell River, British Columbia, Canada V9W 3K7. 12 pp. 9 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 142 Brooks, K.M. 2004. Metal loss rates in a dynamic leaching system from Strong-Seal fibreglass wrapped CCA-C treated wood. Technical report prepared for Wood Preservers Incorporated, P.O. Box 158, Warsaw, Virginia 22572. 8 pp. 143 Brooks, K.M. 2004. Modelling, managing and assessing the environmental risks associated with the use of creosote treated wood products. Technical report prepared for Creosote Council Europe, care of Per Bech A/S, Koppers Denmark, Avernakke, 5800, Nyborg, Denmark. 84 pp. 144 Brooks, K.M. 2004. Polycyclic Aromatic Hydrocarbon Migration From Creosote-Treated Railway Ties Into Ballast and Adjacent Wetlands. Res. Pap. FPL-RP-617. Madison, WI: U.S. Department of Agriculture, Forest Service, Forest Products Laboratory. 53 pp. 145 Brooks, K.M. 2004. Polycyclic Aromatic Hydrocarbon Migration From Creosote-Treated Railway Ties Into Ballast and Adjacent Wetlands. Res. Pap. FPL-RP-617. Madison, WI: U.S. Department of Agriculture, Forest Service, Forest Products Laboratory. 53 pp. 146 Brooks, K.M. 2004. September 2004 sediment physicochemical monitoring at Hubbs-SeaWorld Research Institute’s enhancement netpens located at Santa Catalina Island, Aqua Hedionda Laboon and San Diego Bay. Technical report prepared for Hubbs-SeaWorld Research Institute 2595 Ingraham Street, San Diego, CA 92109. 29 pp. 147 Brooks, K.M. 2005 (In-review) Computer model and risk assessment predicting the aquatic environmental response to bridges constructed using creosote preserved wood. Technical report prepared for the U.S. Department of Agriculture, Forest Service, Forest Products Laboratory, Madison, WI 53705. Timber Bridge Joint Venture Agreement 01-JV-11111136-104. 86 pp. 148 Brooks, K.M. 2005. Baseline information describing sediment physicochemistry of Totten Inlet and the macrobenthos of the proposed North Totten Inlet mussel farm. Technical report prepared for Taylor Resources, Southeast 130 Lynch Road, Shelton, WA 98584. 53 pp. 149 Brooks, K.M. 2005. Baseline information describing sediment physicochemistry of Totten Inlet and the macrobenthos of the proposed North Totten Inlet mussel farm. Technical report prepared for Taylor Resources, Southeast 130 Lynch Road, Shelton, WA 98584. 53 pp. 150 Brooks, K.M. 2005. Benthic response at the Deepwater Point mussel farm in Totten Inlet, Puget Sound,. Washington State USA. Technical report prepared for Taylor Resources, Southeast 130 Lynch Road, Shelton, WA 98584. 45 pp. 151 Brooks, K.M. 2005. Biological evaluation and essential fish habitat assessment – road crossing over the Middle Branch of Cassalery Creek and adjacent wetlands. U.S. Army Corps of Engineers Reference D200401495-3755. Prepared for Four Seasons Engineering, Port Angeles, Washington 98362. 19 pp. 152 Brooks, K.M. 2005. Biological evaluation and essential fish habitat assessment – road crossing over the Middle Branch of Cassalery Creek and adjacent wetlands. U.S. Army Corps of Engineers Reference D200401495-3755. Prepared for Four Seasons Engineering, Port Angeles, Washington 98362. 19 pp. 153 Brooks, K.M. 2005. Copper and tebuconazole loss rates from southern yellow pine treated to a retention of 0.246 pounds per cubic foot with CA-B preservative. Technical report produced for Arch Wood Protection, 1955 Lake Park Drive, Smyrna, Georgia 30080. 38 pp. plus appendices. 154 Brooks, K.M. 2005. Copper, zinc and arsenic loss rates from Douglas fir piling treated to a nominal retentions 1.0 and 1.5 pounds per cubic foot with Ammoniacal Copper Zinc Arsenate (ACZA) preservative and receiving four different post treatment Best Management Practices designed to minimize metal losses to fresh- and saltwater environments. Technical report prepared for J.H. Baxter and Company, 1700 South El Camino Real, San Mateo, CA 94402. 41 pp. 155 Brooks, K.M. 2005. Copper, zinc and arsenic loss rates from Douglas fir piling treated to a nominal retentions 1.0 and 1.5 pounds per cubic foot with Ammoniacal Copper Zinc Arsenate (ACZA) preservative and receiving four different post treatment Best Management Practices designed to minimize metal losses to fresh- and saltwater environments. Technical report prepared for J.H. Baxter and Company, 1700 South El Camino Real, San Mateo, CA 94402. 41 pp. 10 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 156 Brooks, K.M. 2005. Metal loss rates to rainfall falling on 2”x6” lumber treated with Ammoniacal Copper Zinc Arsenate (ACZA) preservative. Technical report produced for J.H. Baxter and Company, 1700 South El Camino Real, San Mateo, CA 94402. 12pp. 157 Brooks, K.M. 2005. The affects of water temperature, salinity and currents on the survival and distribution of the infective copepodid stage of sea lice (Lepeophtheirus salmonis ) originating on Atlantic salmon farms in the Broughton Archipelago of British Columbia, Canada. Reviews in Fisheries Science. 13:177-204. 158 Brooks, K.M. 2005. The epibenthic community observed in association with the intensive raft culture of Mytilus edulis galloprovincialis in Totten Inlet, Washington. Funded by the U.S. Department of Commerce Award No. NA16RG1591. Submitted to Pacific Shellfish Institute, 120 State Avenue NE #142, Olympia, WA 98501. 159 Brooks, K.M. 2006. Assessing the environmental costs associated with the netpen culture of Atlantic salmon in the Northeast Pacific. 59 pp. Food and Agriculture Organization of the United Nations (FAO) and World Fisheries Trust (WFT) Workshop on Comparative Environmental Costs of Aquaculture and Other Food Production Sections – 24-28 April 2006, Vancouver, British Columbia, Canada. In-press by FAO. 160 Brooks, K.M. 2006. DRAFT Supplemental Best Available Science. Produced for the Jefferson County Critical Area Ordinance Review Committee. Aquatic Environmental Sciences, 644 Old Eaglemount Road, Port Townsend, Washington 98368. 67 pp. 161 Brooks, K.M. 2006. Sediment physicochemical monitoring at delayed release netpens and raceways for white seabass located in southern California during 2004 and 2005. Report prepared for Hubbs-Sea World Research Institute, California Department of Fish and Game and Advisors to the Ocean Resources Enhancement and Hatchery Program (OREHP). Aquatic Environmental Sciences, 644 Old Eaglemount Road, Port Townsend, WA 98368. 97 pp. 162 Brooks, K.M. 2006. Sediment physicochemical monitoring at delayed release netpens and raceways for white seabass located in southern California during 2004 and 2005. Report prepared for Hubbs-Sea World Research Institute, California Department of Fish and Game and Advisors to the Ocean Resources Enhancement and Hatchery Program (OREHP). Aquatic Environmental Sciences, 644 Old Eaglemount Road, Port Townsend, WA 98368. 97 pp. 163 Brooks, K.M. 2006. Supplemental study of dissolved nutrients and particulate organic matter in waters near the proposed mussel farm in North Totten Inlet, Washington State, USA. Technical report prepared for Taylor Resources, Southeast 130 Lynch Road, Shelton, WA 98584. 48 pp. 164 Brooks, K.M. 2006. Supplemental study of dissolved nutrients and particulate organic matter in waters near the proposed mussel farm in North Totten Inlet, Washington State, USA. Technical report prepared for Taylor Resources, Southeast 130 Lynch Road, Shelton, WA 98584. 48 pp. 165 Brooks, K.M. 2007. An analysis of sediment sulfide and macrobenthic data for purposes of assessing the concept of ecological threshold in monitoring the benthic effects of fish farms. British Columbia Ministry of Environment Contract CNAEN07029. Technical report produced for the British Columbia Ministry of Environment 2080-A Labieux Road, Nanaimo, British Columbia V9T 6J9. 63 pp., plus appendices 166 Brooks, K.M. 2007. An analysis of sediment sulfide and macrobenthic data for purposes of assessing the concept of ecological threshold in monitoring the benthic effects of fish farms. British Columbia Ministry of Environment Contract CNAEN07029. Technical report produced for the British Columbia Ministry of Environment 2080-A Labieux Road, Nanaimo, British Columbia V9T 6J9. 63 pp., plus appendices 167 Brooks, K.M. 2007. Sediment physicochemical monitoring at delayed release netpens and raceways for white seabass located in Southern California during the period 2004 through 2006. Technical report produced for Hubbs-Sea World Research Institute, California Department of Fish and Game, and Advisors to the Ocean Resources Enhancement and Hatchery Program (OREHP). 118 pp. 11 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 168 Brooks, K.M. 2007. Supplemental best available science supporting recommendations for wetland buffer widths in Jefferson County, Washington. Aquatic Environmental Sciences, 644 Old Eaglemount Road, Port Townsend, Washington. 169 Brooks, K.M. 2007a. Jefferson County Critical Area Ordinance Review Committee – Response to the Department of Ecology critique of Brooks (2006) dated March 9, 2007. Aquatic Environmental Sciences, 644 Old Eaglemount Road, Port Townsend, Washington 98368. 71 pp. 170 Brooks, K.M. 2007b. Background information and development of recommendations for wetland buffers by the Jefferson County Critical Area Ordinance Review Committee. Aquatic Environmental Sciences, 644 Old Eaglemount Road, Port Townsend, Washington 98368. 67 pp. 171 Brooks, K.M. and C.V.W. Mahnken. 2003. Interactions of Atlantic Salmon in the Pacific Northwest Environment. II. Organic Wastes. Fisheries Research, Vol. 62, Issue 3, pp. 255 – 293. 172 Brooks, K.M. and C.V.W. Mahnken. 2003. Interactions of Atlantic salmon in the Pacific Northwest Environment. III. Accumulation of zinc and copper. Fisheries Research, Vol. 62, Issue 3, pp. 295-305. 173 Brooks, K.M. and D.J. Stucchi. 2006. The Effects of Water Temperature, Salinity and Currents on the Survival and Distribution of the Infective Copepodid Stage of the Salmon Louse (Lepeophtheirus salmonis ) Originating on Atlantic Salmon Farms in the Broughton Archipelago of British Columbia, Canada (Brooks, 2005) – A Response to the Rebuttal of Krkosek et al. (2005a). Reviews in Fisheries Science. 14:13-23. 174 Brooks, K.M., C. Mahnken and C. Nash. 2002. Environmental Effects Associated with Marine Netpen Waste with Emphasis on Salmon Farming in the Pacific Northwest. In: Responsible Marine Aquaculture, Eds: Stickney and McVey. CABI Publishing, Wallingford, United Kingdom pp. 159 – 204. 175 Brooks, K.M., D. Goyette and S. Christie. 2006. Sooke Basin Creosote Evaluation – Results of the October 2005 Reconnaissance Survey. Creosote Evaluation Committee, Fisheries and Oceans Canada, Pacific Yukon Region, 201-401 Burrard Street, Vancouver, British Columbia, Canada V6C 3S5. 150 pp. 176 Brooks, K.M., D.E. Konasewich, H.C. Bailey, E.B. Szenasy and G.E. Brudermann. 1996. Antisapstain chemical Technical Review. Prepared for the British Columbia Ministry of Environment; Subcommittee on Antisapstain chemical Waste Control Regulation Amendments of the B.C. Stakeholder Forum on Sapstain Control. 133 pp. 177 Brooks. K.M. 1997. Literature Review and Assessment of the Environmental Risks Associated with the Use of ACZA Treated Wood Products in Aquatic Environments. Second Edition. Prepared for the Western Wood Preservers' Institute 7017 NE Highway 99, Suite 108, Vancouver, WA 98665. 98 pp. 178 Brosofske, K.D, J. Chen, R. J. Naiman, and J. F. Franklin. Harvesting effects on microclimatic gradients from small streams to uplands in western Washington. Ecological Applications, 7(4), 1997, pp. 1188–1200. 179 Brosofske, K.D., J. Chen, R.J. Naiman, and J.F. Franklin. 1997. Harvesting effects on microclimatic gradients from small streams to uplands in western Washington. Ecological Applications 7:188-1200. 180 Browdy, C. L. and J. A. Hargreaves (editors). 2009. Overcoming Technical Barriers to the Sustainable Development of Competitive Marine Aquaculture in the United States. Summary of a Workshop on Enhancing Competitiveness of Sustainable Marine Aquaculture in the United States: Addressing Measurement Barriers to Technological Innovation. 120 pp. 181 Brumme, C.J., Abbe, T.B., Sampson, J.R. & Montgomery, D.R. 2006. Influence of vertical channel change associated with accumulations on delineated channel migration zones, Washington, USA. Geomorphology 80, 2006. 295-309. 12 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 182 Brummer, C. J. et al. 2006. Influence of vertical channel change associated with wood accumulations on delineating channel migration zones, Washington, USA. Geomorphology, 80 (2006) 295–309. November, 2006. www.elsevier.com/locate/geomorph 183 Brummer, C.J. 2007. Effects of Riparian Forest Recovery on the Delineation of Channel Migration Zones. Geologic Society Annual Meeting, Seattle May 4-6, 2007. 184 Buckhouse and Gifford. 1976. Water Quality Implications of Cattle Grazing on a Semiarid Watershed in Southeastern Utah. J. Range Management 29(2):109-113. 185 Bulthuis, D.A. 1994. Light environments/implications for management. Pages 23-27 in Wyllie-Echeverria, S., A.M. Olson, and M.J. Hershman (eds.). Seagrass Science and Policy in the Pacific Northwest: Proceedings of a Seminar Series School of Marine Affairs. University of Washington, Seattle, WA. 186 Buschmann, A. H., V. A. Riquelme, M. C. Hernandez-Gonzalez, D. Varela, J. E. Jimenez, L. A. Henriquez, P. A. Vergara, R. Guinez, L. Filun. 2006. A review of the impacts of salmonid farming on marine coastal ecosystems in the southeast Pacific. ICES Journal of Marine Science. Vol. 63. Pp. 1338 - 1345. 187 Bussell, M. 2011. EPA Ltr to Susewind and Pendowski, Ecology. Revised Sediment Management Standards (WAC 173-204) including the Marine Finfish Rearing Facility Provision, as submitted on June 3, 1996. 32 pp. 188 Caicco, S.L. 1989. Natural Features Report: Dabob Bay Natural Area Reserve. Prepared for Division of Land and Water Conservation, Department of Natural Resources, Olympia, Washington 189 Cairns, J. Jr. 1988. Increasing Diversity by Restoring Damaged Ecosystems. In: National Research Council. 1992. Restoration of Aquatic Ecosystems: Science, Technology and Public Policy. Washington, DC: National Academy Press. 190 Cascadia Consulting Group. 2003. Watershed Management Plan for the Quilcene-Snow Water Resource Inventory Area (WRIA 17). Report to the Jefferson County Natural Resources Division. October 28, 2003. 191 Cascadia Consulting Group. 2006. Summary of Watershed Management Plan for the Skokomish-Dosewallips Water Resource Inventory Area (WRIA 16). Report to the Mason County Department of Community Development. 192 Casola, J., J. Kay, A. Snover, R. Norheim, and L. Whitely Binder. 2005. Climate Impacts on Washington’s Hydropower, Water Supply, Forests, Fish, and Agriculture. Prepared for King County Conference on Climate Change, by University of Washington Climate Impacts Group. October 27, 2005. Available at: http://www.cses.washington.edu/cig/outreach/workshops/kc2005.shtml 193 Casola, J., J. Kay, A. Snover, R. Norheim, and L. Whitely Binder. 2005a. Climate Impacts on Washington’s Hydropower, Water Supply, Forests, Fish, and Agriculture. Prepared for King County Conference on Climate Change, by University of Washington Climate Impacts Group. October 27, 2005. Available at: http://www.cses.washington.edu/cig/outreach/workshops/kc2005.shtml 194 Casola, J., J. Kay, and A. Snover. 2005b. Climate Change Impacts Sector Fact Sheets. Prepared for King County Conference on Climate Change, by University of Washington Climate Impacts Group. October 27, 2005. Available at: http://www.cses.washington.edu/cig/outreach/workshops/kc2005.shtml 195 Castelle, A.J., A.W. Johnson and C. Conolly. 1994. Wetland and Stream Buffer Size Requirements – A review. J. Environ. Qual. 234:878-882. 196 Castelle, A.J., A.W. Johnson, and C. Conolly. 1994. Wetland and stream buffer size requirements—a review. Journal of Environmental Quality 23:878-882. 197 Cederholm, C. J., et.al. 2000. Pacific Salmon and Wildlife – Ecological contexts, relationships, and implications for management. Special Edition Technical Report, Prepared for D.H. Johnson and T.A. O’Neil (Managing Directors), Wildlife-Habitat Relationships in Oregon and Washington. Washington Department of Fish and Wildlife, Olympia. 13 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 198 Cederholm, C.J., D.B. Houston, D.L. Cole, W.J. Scarlett. 1989. Fate of Coho Salmon (Oncorhynchus kisutch) Carcasses in Spawning Streams. Canadian Journal of Fisheries and Aquatic Sciences. 46:1347-1355. 199 Cederholm, C.J., L.M. Reid, and E.O. Salo. 1980. Cumulative Effects of Logging Road Sediment on Salmonid Populations in the Clearwater River, Jefferson County, Washington. Contribution No. 543, College of Fisheries, University of Washington, Seattle, Washington. 200 Central Puget Sound Growth Management Hearings Board. 2007. Digest of Decisions 1992-2007. (February 2007) 201 Chemical Treatments: SLICE / Farmed and Dangerous. 4 pp. 202 Chen, J. et al. 1999. Microclimate in Forest Ecosystem and Landscape Ecology: Variations in local climate can be used to monitor and compare the effects of different management regimes. BioScience Vol. 49 No. 4, pp 288 – 297. 203 Christensen, D. 2004. Environmental Analysis of Brinnon Subarea and Associated Comprehensive Plan and UDC Amendments, Jefferson County Natural Resources Division. Available at: http://www.co.jefferson.wa.us/commdevelopment/Brinnon%20Plan/Addendum%20to%20FEIS%201-26- 2004%20FINAL%20.pdf 204 Christiansen, D. 2004. Review of Best Available Science for 2004 Comprehensive Plan and Development Regulations Update. September 22, 2004. 205 Christiansen, D. 2005. Draft Hood Canal/Eastern Strait of Juan de Fuca Summer Chum Salmon Recovery Plan . November 15, 2005. Draft report to Jefferson County Natural Resources Department. 206 Chu, Y.H., 1985. Beach erosion and protection: a case study at Lincoln Park, Seattle: Shore and Beach 53: 26- 32. 207 Clallam County. 2012. Clallam County SMP Final Draft Chapter 2, Clallam County, Washington. 208 Clallam County. 2012. Clallam County SMP Final Draft Chapter 3, Clallam County, Washington. 209 Clark, M. 2007. Letter to Dr. Brooks describing the effectiveness of voluntary programs undertaken by the Washington State Conservation Commission and the state’s 39 Conservation Districts. Washington State Conservation Commission. PO Box 47721, Olympia, WA 98504-7721. 210 Clary, W.P., C.I. Thornton, and S.R. Abt. 1996. Riparian stubble height and recovery of degraded Streambanks. Rangelands 18:137-140. 211 Clogston, S. and S. Hopkins, personal communication to Michelle McConnell, Project Coordinator, May 17, 2007. 212 Coffin, B.A. and R.D. Harr. 1992. Effects of forest cover on volume of water delivery to soil during rain-on- snow. Final Report, Project SH-1. Sediment, Hydrology, and Mass Wasting Steering Committee, Timber/Fish/Wildlife program, Olympia, Washington. 213 Collins, B. D., and D. R. Montgomery. 2002. Forest development, wood jams, and restoration of floodplain rivers in the Puget Lowland, Washington. Restoration Ecology 10(2):237-247. 214 Collins, B. D., D. R. Montgomery, and A. D. Haas. 2002. Historical changes in the distribution and functions of large wood in Puget Lowland rivers. Canadian Journal of Fisheries and Aquatic Sciences (59):66-76. 215 Collins, B.D., and Sheikh A.J. 2005. Historical reconstruction, classification, and change analysis of Puget Sound tidal marshes. Project Completion Report to: Washington Dept. Natural Resources, Aquatic Resources Division. Olympia, Washington 98504-7027. Puget Sound River History Project, Dept. of Earth and Space Sciences, Seattle, Washington 98195. 216 Collins, B.D., D.R. Montomery, and A.J. Sheikh. 2003. Chapter 4: Reconstructing the historic riverine landscape of the Puget lowland. In: Montgomery, D.R., S. Bolton, D.B. Booth, and L. Wall (eds.). Restoration of Puget Sound Rivers. University of Washington Press.p. 79-128. 14 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 217 Collins, B.D., D.R. Montomery, and A.J. Sheikh. 2003. Chapter 4: Reconstructing the historic riverine landscape of the Puget lowland. In: Montgomery, D.R., S. Bolton, D.B. Booth, and L. Wall (eds.). Restoration of Puget Sound Rivers. University of Washington Press.p. 79-128. 218 Community Trade and Economic Development Portal on BAS http://www.cted.wa.gov/portal/alias__CTED/lang__en/tabID__418/DesktopDefault.aspx 219 Conners, B. M., M. Krkosek, J. Ford, and L. M. Dill. 2010. Coho salmon productivity in relation to salmon lice from infected prey and salmon farms. Journal of Applied Ecology, Vol. 47. Pp. 1372 - 1377. 220 Connors, B. M., M. Krkosek and L. M. Dill. 2008. Biology Letters. Sea lice escape predation on their host. 4 pp. 221 Cooke, Sarah, et al. 2002. Pacific Northwest Forested Wetland Literature Survey Synthesis. Cooke Scientific Services. November 1, 2002. Forested Wetlands and Silvicultural Practices Workshop presentation downloads available at: http://www.cookescientific.com/FWWS_Downloads.HTM 222 Correa, G. 2002. Salmon and Steelhead Habitat Limiting Factors WRIA 17, Quilcene-Snow Basin, Washington State Conservation Commission. 223 Correa, G. 2003. Salmon and Steelhead Habitat Limiting Factors WRIA 16, Skokomish-Dosewallips Basin, Washington Conservation Commission. 224 Correa, G. 2003. Salmon and Steelhead Habitat Limiting Factors WRIA 16, Washington Conservation Commission. 225 Costello, M. J. Proceedings of the Royal Society - Biological Sciences. 2009. How sea lice from salmon farms may cause wild salmonid declines in Europe and North America and be a threat to fishes elsewhere. 11 pp. 226 Cox, S.E., F.W. Simonds, L. Doremus, R.L. Huffman, and R.M. Defawe. 2005. Ground Water/Surface Water Interactions and Quality of Discharging Ground Water in Streams of the Lower Nooksack River Basin, Whatcom County, Washington. U.S. Geological Survey Scientific Investigations Report 2005-5255. 46 p. 227 Crittenden, R.N. 1978. A theoretical model for the water temperature of small clear streams. Ecol. Mod. 5: 207-224. 228 Crittenden, R.N. 1992. Salmon at Risk, first edn. Hargrave Publishing, Carlsborg WA. 229 Crittenden, R.N. 1994. Optimum Escapement Computed using the Ricker Spawner Recruit Curve. Fisheries Research . 20: 215-227. 230 Cullinan, T. 2001. Important Bird Areas of Washington, Audubon Washington. Available at: http://www.audubon.org/chapter/wa/wa/PDFs/IBA-51-92_Western_Lowlands.pdf 231 Cummins, K. W. and M. A. Wilzbach. 2005. The inadequacy of the fish-bearing criterion for stream management. Overview Article, Aquatic Sciences 67: 486-49120. January, 2005. 232 Davis, J. 2006. personal communication to ESA Adolfson, comments on preliminary draft I&C report. October 2006 233 Department of Ecology. September 25, 2006. Individual NPDES/State Permits/General Permits. 2 pp. 234 Department of Fish and Wildlife. 2006. Policy 5104. 235 Department Of Natural Resources. 2010. Smith & Minors Islands Aquatic Reserve Management Plan. 236 Department of Natural Resources. 2012. Washington State Aquatic Reserves. 237 Desbonnet, A., Pogue, P., Lee, V., and N. Wolff. 1994. Vegetated buffers in the coastal zone: A summary review and bibliography. Coastal Resources Center Technical Report No. 2064. University of Rhode Island Graduate School of Oceanography, Narragansett, Rhode Island. 72pp. 238 Desbonnet, A., V. Lee, P. Pogue, D. Reis, J. Boyd, J. Willis, and M. Imperial. 1995. Development of coastal vegetated buffer programs. Coastal Management, Vol. 23, pp. 91-109. 15 of 43 12-9-2013 Jefferson County SMP Update Exhibit B. Bibliography of Scientific and Technical Information Considered 239 Diana. S. James, Egna. S. Hillary, and more. 2013. Responsible Aquaculture in 2050: Valuing Local Conditions and Human Innovations Will Be Key to Success. 240 Diefenderfer, H L., K L. Sobocinski, R. M. Thom, C. W. May, S. L. Southard, A. B. Borde, C. Judd, J. Vavrinec, and N. K. Sather. 2006. Multi-Scale Restoration Prioritization for Local and Regional Shoreline Master Programs: A Case Study from Jefferson County, Washington. Battelle Marine Sciences Laboratory, Sequim, Washington Report No. PNWD-3762. November 22, 2006. 241 Diefenderfer, H L., K L. Sobocinski, R. M. Thom, C. W. May, S. L. Southard, A. B. Borde, C. Judd, J. Vavrinec, and N. K. Sather. 2006a. Jefferson County Marine Shoreline Restoration Prioritization: Summary of Methods. Battelle Marine Sciences Laboratory, Sequim, Washington. Report No. PNWD-3762. November 22, 2006. 242 Diefenderfer, H L., K L. Sobocinski, R. M. Thom, C. W. May, S. L. Southard, A. B. Borde, C. Judd, J. Vavrinec, and N. K. Sather. 2006b. Multi-Scale Restoration Prioritization for Local and Regional Shoreline Master Programs: A Case Study from Jefferson County, Washington. Battelle Marine Sciences Laboratory, Sequim, Washington Report - Not for Distribution. 243 Dillaha, T.A. and S.P. Inamdar. 1997. Buffer Zones as Sediment Traps or Sources. In: Buffer Zones: Their Processes and Potential in Water Protection. Eds: N.E. Haycock, T.P. Burt, K.W.T. Goulding and G. Pinay. 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Water Quality in the Puget Sound Basin, Washington and British Columbia, 1996-1998. U.S. Geological Survey Circular 1216. 31pp. 257 Ebersole, J.L. et al. 2006. Juvenile Coho Salmon Growth and Survival across Stream Network Seasonal Habitats. Transactions of the American Fisheries Society 135:1681–1697, 2006 258 Edge, W.D. 2001. Wildlife of Agriculture, Pastures, and Mixed Environments. In: Johnson, D.H. and T.A. O’Neil (eds). Wildlife-Habitat Relationships in Oregon and Washington. Oregon State University Press, Corvallis. Pp. 342-360. 259 Edwards, D.R., B.T. Larson and T.T. Lim. 2000. Runoff Nutrient and Fecal Coliform Content From Cattle Manure Application to Fescue Plots. J. American Water Res. Assn. 36(4):711-721. 260 Edwards, D.R., T.C. Daniel and P.A. Moore Jr. 1996. Vegetative Filter Strip Design for Grassed Areas Treated with Animal Manures. 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Reach Analysis. Hoh River in the vicinity of U.S. Highway 101, milepost 17.6.6 170.2. Prepared for the Washington State Department of Transportation, Environmental Affairs Office. 335 Herrera Environmental Consultants (Herrera). et al. 2002. Reach Analysis: Hoh River in the Vicinity of U.S. Highway 101, MP 176.6 to MP 170.2. Prepared for WSDOT. April, 2002. 336 Heufelder, G.R. and S.G. Rask. No date. Survival and Transport of Enteric Bacteria and Viruses in the Nearshore Marine Environment: An Annotated Bibliography. Excerpted on: http://www.learntitle5.org/Apendix1.htm 337 Hicks, M. 1998a. Evaluating Standards for Protecting Aquatic Life In Washington’s Surface Water Quality Standards Temperature Criteria. Sponsored by the Washington State Department of Ecology Water Quality Program Watershed Management Section, Olympia, Washington 98504-7710. 338 Hicks, M. 1998b. Water Quality Antidegradation Implementation Plan. Example of Possible Rule Language to Replace Chapter 173-201A-070 WAC. 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Granger, T. Duebendorfer, R. Friesz, B. Lang, B. Leonard, K. March, and A. Wald. 2000. Methods for Assessing Wetland Functions, Volume II: Depressional Wetlands in the Columbia Basin of Eastern Washington. Publication #00-06-47. Washington State Department of Ecology. Olympia, Washington. 356 http://depts.washington.edu/cwws/Outreach/Publications/Salmon%20and%20Turbidity.pdf 357 Hubanks, R.L. 2007. Letter to Dr. Brooks from the NRCS State Conservations regarding the efficacy of voluntary stewardship programs. U.S. Department of Agriculture. Natural Resources Conservation Service (NRCS), 316 W. Boone Ave. Suite 450, Spokane, Washington 99201-2348. 358 Hutchinson, W., M. Jeffrey, D. O'Sullivan, D. Casement and S. Clarke. Inland Aquaculture Association of South Australia, Inc. January 2004. Recirculating Aquaculture Systems. Minimum Standards for Design, Construction and Management. 76 pp. 359 Icicle Acquisition Subsidiary LLC, DBA American Gold Seafoods. June 2009. 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